Function reference • miaSim

All functions

.applyInterType(): Generate pairs of interactions according to interaction types

.estimateAFromSimulations(): Get the interspecies interaction matrix A using leave-one-out method

.getInteractions(): Generate interactions according to five types of interactions and their weights

.isPosInt(): Check whether a number is a positive integer

.replaceByZero(): Replace one element with zero in a list

powerlawA(): Interaction matrix with Power-Law network adjacency matrix

randomA(): Generate random interaction matrix for GLV model

randomE(): Generate random efficiency matrix

rdirichlet(): Generate dirichlet random deviates

simulateConsumerResource(): Consumer-resource model simulation

simulateEventTimes(): Generate a vector of event times

simulateGLV(): Generalized Lotka-Volterra (gLV) simulation

simulateHubbell(): Hubbell's neutral model simulation

simulateHubbellRates(): Hubbell's neutral model simulation applied to time series

simulateRicker(): Generate time series with the Ricker model

simulateSOI(): Self-Organised Instability model (SOI) simulation

simulateStochasticLogistic(): Stochastic Logistic simulation