Wrapper for scater::plotReducedDim()

Source: R/plotNDMS.R

Wrapper for scater::plotReducedDim()

plotNMDS(x, ..., ncomponents = 2)

Arguments

x

a SummarizedExperiment object.

...

additional arguments passed to scater::plotReducedDim().

ncomponents

Numeric scalar. indicating the number of dimensions to plot, starting from the first dimension. Alternatively, a numeric vector specifying the dimensions to be plotted. (Default: 2)