Panels

Compositional analysis

AbundancePlot-class AbundancePlot

Abundance plot

AbundanceDensityPlot-class AbundanceDensityPlot

Abundance density plot

Ordination analysis

RDAPlot-class RDAPlot

RDA plot

ScreePlot-class ScreePlot

Scree plot

LoadingPlot-class LoadingPlot

Loading plot

Structural analysis

TreePlot-class TreePlot

Tree plot

RowTreePlot-class RowTreePlot

Row tree plot

ColumnTreePlot-class ColumnTreePlot

Column tree plot

GraphPlot-class GraphPlot

Graph plot

RowGraphPlot-class RowGraphPlot

Row graph plot

ColumnGraphPlot-class ColumnGraphPlot

Column graph plot

Interface

Default layout

iSEE()

iSEE layout for TreeSE

Package

iSEEtree-package iSEEtree

iSEE extension for the TreeSummarizedExperiment container