Appendix E — Example solutions for exercises

E.1 Introduction

These example solutions are related to exercises in Chapter 1 and Chapter 2.

E.2 Data containers

These example solutions are related to exercises in Chapter 3.

E.3 Import

These example solutions are related to exercises in Chapter 4.

E.4 Convert & export

These example solutions are related to exercises in Chapter 5.

E.5 Taxonomic information

These example solutions are related to exercises in Chapter 6.

E.6 Data wrangling

These example solutions are related to exercises in Chapter 7.

E.7 Agglomeration

These example solutions are related to exercises in Chapter 9.

E.8 Transformation

These example solutions are related to exercises in Chapter 10.

E.9 Exploration & quality control

These example solutions are related to exercises in Chapter 11.

E.10 Community composition

These example solutions are related to exercises in Chapter 12.

E.11 Alpha Diversity

These example solutions are related to exercises in Chapter 13.

E.12 Community similarity

These exercises are related to exercises in Chapter 14.

E.13 Community typing

These example solutions are related to exercises in Chapter 15.

E.14 Differential abundance

These example solutions are related to exercises in Chapter 16.

E.15 Correlation

These example solutions are related to exercises in Chapter 17.

E.16 Mediation

These example solutions are related to exercises in Chapter 18.

E.17 Network learning & analysis

These example solutions are related to exercises in Chapter 19.

E.18 Network comparison

These example solutions are related to exercises in Chapter 20.

E.19 Cross-association

These example solutions are related to exercises in Section 21.1.

E.20 Ordination-based multiassay analysis

These example solutions are related to exercises in Chapter 22.

E.21 Multi-omics prediction and classification

These example solutions are related to exercises in Chapter 23.

E.22 Machine learning

These example solutions are related to exercises in Chapter 24.